Jahn, Katharina; Sudek, Henner; Stoye, Jens: Multiple genome comparison based on overlap regions of pairwise local alignments. In: BMC Bioinformatics. Jg.13 H. Suppl. 19: Proc. of RECOMB-CG 2012. 2012

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Methods

Preliminaries
Upper bound for the number of MOIs
Algorithms for finding maximum overlapping intervals

Algorithm LinearMOI
Algorithm CircularMOI
Algorithm TestMOI

Weighted maximum overlapping intervals

Algorithm LinearWeightedMOI
Algorithm CircularWeightedMOI

Results and discussion
Conclusions
Acknowledgements
Author details
Authors' contributions
Competing interests
References

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