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The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family
Tauch, Andreas ; Schlüter, Andreas ; Bischoff, N. ; Goesmann, Alexander ; Meyer, F. ; Pühler, AlfredIn: Molecular Genetics and Genomics, Jg. 268 H. 5, S. 570-584Absence of intrinsic electric conductivity in single dsDNA molecules
Kleine, Hermann ; Wilke, Ralf ; Pelargus, Christoph ; Rott, Karsten ; Pühler, Alfred ; Reiss, Günter ; Ros, Robert ; Anselmetti, DarioIn: Journal of Biotechnology, Jg. 112 H. 1-2, S. 91-95Absence of the highly expressed small carbohydrate-binding protein Cgt improves the acarbose formation in Actinoplanes sp. SE50/110
Schaffert, Lena ; Schneiker-Bekel, Susanne ; Gierhake, Jessica ; Droste, Julian ; Persicke, Marcus ; Rosen, Winfried ; Pühler, Alfred ; Kalinowski, JörnIn: Applied Microbiology and Biotechnology, Jg. 104, S. 5395–5408 ff.BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison
Bartels, Daniela ; Kespohl, Sebastian ; Albaum, Stefan ; Drüke, Tanja ; Goesmann, Alexander ; Herold, Julia ; Kaiser, Olaf ; Pühler, Alfred ; Pfeiffer, Friedhelm ; Raddatz, Günter ; Stoye, Jens ; Meyer, Folker ; Schuster, Stephan C.In: Bioinformatics, Jg. 21 H. 7, S. 853-859Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis
Maus, Irena ; Kim, Yong Sung ; Wibberg, Daniel ; Stolze, Yvonne ; Off, Sandra ; Antonczyk, Sebastian ; Pühler, Alfred ; Scherer, Paul ; Schlüter, AndreasIn: Journal of Microbiology and Biotechnology, Jg. 27 H. 2, S. 321-334Characterization of sigma factors of Sinorhizobium meliloti involved in stress response
Cavalcanti de Lucena, Daniella Karine2011Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy
Hansmeier, Nicole ; Bartels, Frank Wilco ; Ros, Robert ; Anselmetti, Dario ; Tauch, Andreas ; Pühler, Alfred ; Kalinowski, JörnIn: J Biotechnol, Jg. 112 H. 1-2, S. 177-193Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry
López, J. L. ; Lozano, M. J. ; Lagares, A. ; Fabre, M. L. ; Draghi, W. O. ; Del Papa, M. F. ; Pistorio, M. ; Becker, A. ; Wibberg, Daniel ; Schlüter, Andreas ; Pühler, Alfred ; Blom, J. ; Goesmann, A. ; Lagares, A.In: mBio, Jg. 10 H. 3Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions
Stolze, Yvonne ; Zakrzewski, Martha ; Maus, Irena ; Eikmeyer, Felix Gregor ; Jaenicke, Sebastian ; Rottmann, Nils ; Siebner, Clemens ; Pühler, Alfred ; Schlüter, AndreasIn: Biotechnology for Biofuels, Jg. 8 H. 1Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion
Trost, Eva ; Götker, Susanne ; Schneider, Jessica ; Schneiker-Bekel, Susanne ; Szczepanowski, Rafael ; Tilker, Alexandra ; Viehöver, Prisca ; Arnold, Walter ; Bekel, Thomas ; Blom, Jochen ; Gartemann, Karl-Heinz ; Linke, Burkhard ; Goesmann, Alexander ; Pühler, Alfred ; Shukla, Sanjay K. ; Tauch, AndreasIn: BMC Genomics, Jg. 11 H. 1Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor
Koeck, Daniela E. ; Maus, Irena ; Wibberg, Daniel ; Winkler, Anika ; Zverlov, Vladimir V. ; Liebl, Wolfgang ; Pühler, Alfred ; Schwarz, Wolfgang H. ; Schlüter, AndreasIn: Genome Announcements, Jg. 4 H. 4, S. e00687-16Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
Strobel, Tina ; Al-Dilaimi, Arwa ; Blom, Jochen ; Gessner, Arne ; Kalinowski, Jörn ; Luzhetska, Marta ; Pühler, Alfred ; Szczepanowski, Rafael ; Bechthold, Andreas ; Rückert, ChristianIn: BMC Genomics, Jg. 13 H. 1The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Schwientek, Patrick ; Szczepanowski, Rafael ; Rückert, Christian ; Kalinowski, Jörn ; Klein, Andreas ; Selber, Klaus ; Wehmeier, Udo F. ; Stoye, Jens ; Pühler, AlfredIn: BMC Genomics, Jg. 13 H. 1Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T)
Jaenicke, Sebastian ; Bunk, Boyke ; Wibberg, Daniel ; Spröer, Cathrin ; Hersemann, Lena ; Blom, Jochen ; Winkler, Anika ; Schatschneider, Sarah ; Albaum, Stefan ; Kölliker, Roland ; Goesmann, Alexander ; Pühler, Alfred ; Overmann, Jörg ; Vorhölter, Frank-JörgIn: Genome Announcements, Jg. 4 H. 6Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1
Krahn, Thomas ; Wibberg, Daniel ; Maus, Irena ; Winkler, Anika ; Nordmann, Patrice ; Pühler, Alfred ; Poirel, Laurent ; Schlüter, AndreasIn: Genome Announcements, Jg. 3 H. 5Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor
Maus, Irena ; Wibberg, Daniel ; Winkler, Anika ; Pühler, Alfred ; Schnürer, Anna ; Schlüter, AndreasIn: Genome Announcements, Jg. 4 H. 3A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani
Verwaaijen, Bart ; Wibberg, Daniel ; Winkler, Anika ; Zrenner, Rita ; Bednarz, Hanna ; Niehaus, Karsten ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: Scientific Reports, Jg. 9 H. 1