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Critical assessment of assembly strategies for non-model species mRNA-Seq data and application of next-generation sequencing to the comparison of C-3 and C-4 species
Bräutigam, Andrea ; Mullick, Thomas ; Schliesky, Simon ; Weber, Andreas P. M.In: Journal of Experimental Botany, Jg. 62 H. 9, S. 3093-3102Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data
Denton, Alisandra K. ; Mass, Janina ; Külahoglu, Canan ; Lercher, Martin J. ; Bräutigam, Andrea ; Weber, Andreas P. M.In: Journal of Experimental Botany, Jg. 68 H. 2, S. 147-160Key changes in gene expression identified for different stages of C-4 evolution in Alloteropsis semialata
Dunning, Luke T. ; Moreno-Villena, Jose J. ; Lundgren, Marjorie R. ; Dionora, Jacqueline ; Salazar, Paolo ; Adams, Claire ; Nyirenda, Florence ; Olofsson, Jill K. ; Mapaura, Anthony ; Grundy, Isla M. ; Kayombo, Canisius J. ; Dunning, Lucy A. ; Kentatchime, Fabrice ; Ariyarathne, Menaka ; Yakandawala, Deepthi ; Besnard, Guillaume ; Quick, W. Paul ; Bräutigam, Andrea ; Osborne, Colin P. ; Christin, Pascal-AntoineIn: Journal of Experimental Botany, Jg. 70 H. 12, S. 3255-3268Most photorespiratory genes are preferentially expressed in the bundle sheath cells of the C-4 grass Sorghum bicolor
Döring, Florian ; Streubel, Monika ; Bräutigam, Andrea ; Gowik, UdoIn: Journal of Experimental Botany, Jg. 67 H. 10, S. 3053-3064Photorespiration connects C-3 and C-4 photosynthesis
Bräutigam, Andrea ; Gowik, UdoIn: Journal of Experimental Botany, Jg. 67 H. 10, S. 2953-2962Photosynthesis in C-3-C-4 intermediate Moricandia species
Schlueter, Urte ; Bräutigam, Andrea ; Gowik, Udo ; Melzer, Michael ; Christin, Pascal-Antoine ; Kurz, Samantha ; Mettler-Altmann, Tabea ; Weber, Andreas P. M.In: Journal of Experimental Botany, Jg. 68 H. 2, S. 191-206Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism
Christin, Pascal-Antoine ; Arakaki, Monica ; Osborne, Colin P. ; Bräutigam, Andrea ; Sage, Rowan F. ; Hibberd, Julian M. ; Kelly, Steven ; Covshoff, Sarah ; Wong, Gane Ka-Shu ; Hancock, Lillian ; Edwards, Erika J.In: Journal of Experimental Botany, Jg. 65 H. 13, S. 3609-3621Systems analysis of cis-regulatory motifs in C-4 photosynthesis genes using maize and rice leaf transcriptomic data during a process of de-etiolation
Xu, Jiajia ; Bräutigam, Andrea ; Weber, Andreas P. M. ; Zhu, Xin-GuangIn: Journal of Experimental Botany, Jg. 67 H. 17, S. 5105-5117Towards an integrative model of C-4 photosynthetic subtypes: insights from comparative transcriptome analysis of NAD-ME, NADP-ME, and PEP-CK C-4 species
Bräutigam, Andrea ; Schliesky, Simon ; Külahoglu, Canan ; Osborne, Colin P. ; Weber, Andreas P. M.In: Journal of Experimental Botany, Jg. 65 H. 13, S. 3579-3593