AGenDA: gene prediction by cross-species sequence comparison
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Pearson, Gareth A. ; Hoarau, Galice ; Lago-Leston, Asuncion ; Coyer, James A. ; Kube, Michael ; Reinhardt, Richard ; Henckel, Kolja ; Serrao, Ester T. A. ; Corre, Erwan ; Olson, Jeanine L.In: Marine Biotechnology, Jg. 12 H. 2, S. 195-213Approximating the DCJ distance of balanced genomes in linear time
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Holley, Guillaume ; Wittler, Roland ; Stoye, JensIn: Algorithms for Molecular Biology, Jg. 11 H. 1Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set
Pucker, Boas ; Holtgräwe, Daniela ; Stadermann, Kai Bernd ; Frey, Katharina ; Huettel, Bruno ; Reinhardt, Richard ; Weisshaar, BerndIn: PLoS One, Jg. 14 H. 5Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS Data
Schilbert, Hanna ; Rempel, Andreas ; Pucker, BoasIn: Plants, Jg. 9 H. 4The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
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Nelkner, Johanna ; Tejerizo, Gonzalo Torres ; Hassa, Julia ; Lin, Timo Wentong ; Witte, Julian ; Verwaaijen, Bart ; Winkler, Anika ; Bunk, Boyke ; Spröer, Cathrin ; Overmann, Jörg ; Grosch, Rita ; Pühler, Alfred ; Schlüter, AndreasIn: Genes, Jg. 10 H. 8Genomics and Transcriptomics Advance in Plant Sciences
Pucker, Boas ; Schilbert, Hanna ; Singh, Sudhir P. (Hrsg.) ; Upadhyay, Santosh Kumar (Hrsg.) ; Pandey, Ashutosh (Hrsg.) ; Kumar, Sunil (Hrsg.)Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines
Brandt, David ; Simunovic, Marina ; Busche, Tobias ; Haak, Markus ; Belmann, Peter ; Jünemann, Sebastian ; Schulz, Tizian ; Klages, Levin Joe ; Vinke, Svenja ; Beckstette, Michael ; Pohl, Ehmke ; Scherer, Christiane ; Sczyrba, Alexander ; Kalinowski, JörnIn: Viruses, Jg. 13 H. 9Natural family-free genomic distance.
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Bergeron, Anne ; Stoye, JensRAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding
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Sielemann, Katharina ; Weisshaar, Bernd ; Pucker, BoasIn: Plant Methods, Jg. 17 H. 1